The Autumn Harvest Cupcakes are the perfect treat to celebrate the joys of fall. Featuring a delightful blend of spiced pumpkin flavors and creamy cheesecake, these cupcakes are sure to impress at any gathering, from Thanksgiving feasts to cozy afternoons with friends. The combination of textures and tastes makes them an irresistible dessert option for all occasions.

Why You’ll Love This Autumn Harvest Cupcakes
These cupcakes offer more than just great taste; they bring comfort and joy to your kitchen.
- Delicious Flavor Fusion: The rich pumpkin spice paired with creamy cheesecake creates a unique dessert experience.
- Seasonal Appeal: Perfectly embodies the essence of autumn with its warm spices and festive presentation.
- Versatile Treat: Great for parties, potlucks, or simply enjoying at home with a hot drink.
- Easy to Make: With straightforward steps, even novice bakers can create these impressive cupcakes.
- Eye-Catching Presentation: Topped with sour cream frosting and graham cracker crumbs, they look as good as they taste.
Tools and Preparation
Gathering the right tools is essential for making your Autumn Harvest Cupcakes efficiently and effectively.
Essential Tools and Equipment
- Muffin tin with liners
- Mixing bowls
- Food processor or rolling pin
- Electric mixer or whisk
- Piping bag
- Measuring cups & spoons
- Cooling rack
Importance of Each Tool
- Muffin tin with liners: Ensures easy removal of cupcakes and provides a neat presentation.
- Electric mixer or whisk: Helps achieve a smooth batter and fluffy frosting quickly.
- Piping bag: Allows for precise frosting application, giving your cupcakes a professional look.
Ingredients
For the Graham Cracker Crust
- 1 sleeve graham crackers, crushed
- 2 tablespoons dark brown sugar
- ½ teaspoon cinnamon
- ¼ cup salted butter, melted
For the Pumpkin Cupcakes
- 2 cups all-purpose flour
- 1 teaspoon baking soda
- 2 teaspoons baking powder
- 1 teaspoon fine sea salt
- 2 teaspoons cinnamon
- 1 teaspoon nutmeg
- 1 teaspoon cloves
- 1 teaspoon ginger
- 4 large eggs
- 1 cup granulated sugar
- ½ cup light brown sugar
- ¾ cup canola oil
- 1 can pumpkin purée (15 oz / ~425 g)
For the Cheesecake Filling
- 8 oz cream cheese, softened
- ½ cup granulated sugar
- 2 teaspoons vanilla bean paste
For the Sour Cream Frosting
- ¾ cup unsalted butter, room temperature
- ½ cup sour cream
- 2 teaspoons vanilla bean paste
- 4½ cups powdered sugar

How to Make Autumn Harvest Cupcakes
Step 1: Prepare the Crust
- In a mixing bowl, combine crushed graham crackers, dark brown sugar, cinnamon, and melted butter until sandy and moist.
- Press about 1 tablespoon into the bottom of each cupcake liner to form the crust.
Step 2: Make Cheesecake Filling
- Beat softened cream cheese in a bowl with granulated sugar and vanilla bean paste until smooth.
- Transfer this mixture into a piping bag and set aside.
Step 3: Mix Pumpkin Cupcake Batter
- In one bowl, whisk together flour, baking soda, baking powder, salt, cinnamon, nutmeg, cloves, and ginger.
- In another large bowl, whisk together eggs, granulated sugar, light brown sugar, canola oil, and pumpkin purée until smooth.
- Fold dry ingredients into the wet mixture just until combined.
Step 4: Assemble Cupcakes
- Fill each prepared liner halfway with pumpkin batter.
- Pipe about 1–2 teaspoons of cheesecake filling into the center of each cupcake.
- Top with more pumpkin batter until liners are about ¾ full.
Step 5: Bake
- Preheat your oven to 350 °F (175 °C).
- Bake for 18–22 minutes or until set; a toothpick should come out mostly clean.
- Cool completely on a wire rack.
Step 6: Frosting
- In a mixing bowl, beat butter until creamy.
- Add sour cream and vanilla; mix well.
- Gradually add powdered sugar while beating until smooth and fluffy.
- Transfer frosting to a piping bag for decorating cooled cupcakes.
Step 7: Finish & Serve
Sprinkle tops with crushed graham cracker crumbs for added texture. Serve these delightful Autumn Harvest Cupcakes alongside cider, tea, or coffee for an unforgettable fall treat!
How to Serve Autumn Harvest Cupcakes
Autumn Harvest Cupcakes are a delightful treat that pairs wonderfully with various beverages and snacks. Here are some creative serving suggestions to enhance your experience with these cozy fall desserts.
With Warm Beverages
- Cider: The sweetness of apple cider complements the spiced flavors in the cupcakes.
- Tea: A warm cup of chai or herbal tea adds a soothing touch to the dessert.
- Coffee: The rich flavor of coffee pairs perfectly, balancing the sweetness of the cupcakes.
For a Festive Gathering
- Thanksgiving Dessert Table: These cupcakes make an impressive addition to holiday feasts.
- Potluck Treats: Share them at gatherings for a seasonal dessert everyone will love.
- Kids’ Parties: Their fun flavors and textures are sure to delight younger guests.
With Toppings and Decorations
- Whipped Cream: A dollop of whipped cream adds extra creaminess and charm.
- Caramel Drizzle: Drizzling caramel sauce on top can elevate the flavor profile.
- Chocolate Shavings: A sprinkle of chocolate shavings offers a nice contrast to the pumpkin flavors.
How to Perfect Autumn Harvest Cupcakes
To ensure your Autumn Harvest Cupcakes are absolutely delicious, consider these helpful tips.
- Bold Spices: Use fresh spices for maximum flavor impact; they truly enhance the autumn vibe.
- Room Temperature Ingredients: Ensure all dairy ingredients are at room temperature for smooth mixing and better texture.
- Don’t Overmix: Fold dry ingredients gently into the wet mixture to keep your cupcakes fluffy and light.
- Check for Doneness: Use a toothpick to check if they’re done; it should come out mostly clean but not dry.
- Cool Completely Before Frosting: Let your cupcakes cool entirely on a wire rack before adding frosting for perfect application.

Best Side Dishes for Autumn Harvest Cupcakes
These cupcakes work well with various sides that complement their rich flavors. Here are some excellent side dishes that pair beautifully with Autumn Harvest Cupcakes.
- Pumpkin Soup: A creamy pumpkin soup offers a savory contrast to sweet cupcakes, making it perfect for fall meals.
- Roasted Vegetables: Seasoned roasted veggies provide a hearty balance to the sweetness of the dessert.
- Apple Crisp: This warm dish adds another layer of fall flavors, enhancing the experience.
- Cheese Platter: A selection of soft cheeses can create an interesting pairing with sweet desserts.
- Spiced Nuts: Crunchy spiced nuts add texture and complexity, complementing the cupcake’s flavors nicely.
- Fruit Salad: A refreshing mix of seasonal fruits keeps things light alongside rich desserts.
Common Mistakes to Avoid
Baking Autumn Harvest Cupcakes can be a delightful experience, but some common mistakes can hinder your success. Here are a few to watch out for:
- Ignoring ingredient temperature: Using cold ingredients, especially eggs and cream cheese, can lead to a lumpy batter. Ensure all ingredients are at room temperature for a smoother texture.
- Overmixing the batter: Overmixing can cause dense cupcakes. Mix just until combined to keep them light and fluffy.
- Not measuring accurately: Baking is a science, and improper measurements can ruin your recipe. Use measuring cups and spoons for accuracy.
- Skipping the cooling step: Frosting warm cupcakes can cause melting. Let them cool completely on a wire rack before frosting.
- Using stale ingredients: Freshness matters, particularly with baking powder and spices. Check expiration dates to ensure the best flavor.
Refrigerator Storage
- Store cupcakes in an airtight container.
- They will last 3-5 days in the refrigerator.
- Keep frosting separate if you plan to frost later.
Freezing Instructions
- Wrap each cupcake tightly in plastic wrap.
- Place wrapped cupcakes in a freezer-safe container.
- They can be frozen for up to 3 months.
Reheating Instructions
- Oven: Preheat to 350°F (175°C), place cupcakes on a baking sheet, and heat for about 10 minutes.
- Microwave: Heat individual cupcakes for 15-20 seconds on medium power.
- Stovetop: Warm in a covered skillet over low heat for 5 minutes, checking frequently.

Frequently Asked Questions
Can I make Autumn Harvest Cupcakes ahead of time?
Yes! You can prepare the cupcake batter and cheesecake filling a day ahead. Just store them separately in the fridge until you’re ready to bake.
What should I serve with Autumn Harvest Cupcakes?
These cupcakes pair wonderfully with cider, tea, or coffee, making them perfect for fall gatherings or Thanksgiving treats.
Can I customize the flavors of my Autumn Harvest Cupcakes?
Absolutely! You can add chocolate chips, nuts, or even different spices like allspice or cardamom to enhance the flavor profile.
How do I store leftover Autumn Harvest Cupcakes?
Store any leftovers in an airtight container in the refrigerator for up to five days or freeze them for longer storage.
Final Thoughts
Autumn Harvest Cupcakes are not only delicious but also versatile enough for various occasions. Their cozy flavors embrace the essence of fall while offering options for customization. We encourage you to try this delightful recipe—your taste buds will thank you!

Autumn Harvest Cupcakes
- Total Time: 45 minutes
- Yield: Makes approximately 12 servings 1x
Description
Indulge in the flavors of fall with these delightful Autumn Harvest Cupcakes. Each cupcake features a moist pumpkin base infused with warm spices, complemented by a luscious cheesecake filling and topped with creamy sour cream frosting. Perfect for any autumn gathering, from Thanksgiving dinners to cozy get-togethers, these cupcakes are as visually stunning as they are delicious. With a graham cracker crust that adds a delightful crunch, they are sure to impress friends and family alike. Simple to make and versatile enough for various occasions, these cupcakes embody the essence of the season.
Ingredients
- 1 sleeve graham crackers, crushed
- 2 tablespoons dark brown sugar
- ½ teaspoon cinnamon
- ¼ cup salted butter, melted
- 2 cups all-purpose flour
- 1 teaspoon baking soda
- 2 teaspoons baking powder
- 1 teaspoon fine sea salt
- 2 teaspoons cinnamon
- 1 teaspoon nutmeg
- 1 teaspoon cloves
- 1 teaspoon ginger
- 4 large eggs
- 1 cup granulated sugar
- ½ cup light brown sugar
- ¾ cup canola oil
- 1 can pumpkin purée (15 oz / ~425 g)
- 8 oz cream cheese, softened
- ½ cup granulated sugar
- 2 teaspoons vanilla bean paste
- ¾ cup unsalted butter, room temperature
- ½ cup sour cream
- 2 teaspoons vanilla bean paste
- 4½ cups powdered sugar
Instructions
- Preheat oven to 350°F (175°C) and prepare muffin tin with liners.
- In a bowl, mix crushed graham crackers with brown sugar and cinnamon; press into cupcake liners for the crust.
- Beat cream cheese with sugar and vanilla until smooth; pipe into the center of each cupcake.
- In another bowl, whisk together flour, baking powder, spices, eggs, sugars, oil, and pumpkin puree; fold into dry ingredients.
- Fill each liner halfway with batter, add cheesecake filling, then top off with more batter.
- Bake for 18–22 minutes; cool completely before frosting.
- Prep Time: 25 minutes
- Cook Time: 20 minutes
- Category: Desserts
- Method: Baking
- Cuisine: American
Nutrition
- Serving Size: 1 cupcake (75g)
- Calories: 310
- Sugar: 28g
- Sodium: 210mg
- Fat: 13g
- Saturated Fat: 7g
- Unsaturated Fat: 5g
- Trans Fat: 0g
- Carbohydrates: 42g
- Fiber: 1g
- Protein: 4g
- Cholesterol: 50mg
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